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DRS-Filer

Synopsis

Microservice implementing the Global Alliance for Genomics and Health (GA4GH) Data Repository Service (DRS) API specification.

Installation

You can find a Helm chart in the GitHub repository of DRS-Filer

Follow these instructions

  • Install Helm

  • Clone the DRS-Filer repository

    git clone https://github.com/elixir-cloud-aai/drs-filer.git

  • Browse to deployment to find the Chart.yaml and the values.yaml files

Usage

First you must create a namespace in Kubernetes in which to deploy DRS-Filer. The commands below assume that everything is created in the context of this namespace. How the namespace is created depends on the cluster, so we won't document it here.

You need to edit the values.yaml file

After this you can deploy DRS-Filer using helm:

helm install drs-filer . -f values.yaml

Updates

If you want to edit any of the Deployments, you can update them with helm and the values.yaml file. Once edited, you can run this command:

helm upgrade drs-filer . -f values.yaml

Technical details

MongoDB

The MongoDB database is deployed using:

  • templates/mongo-deploy.yaml

DRS-Filer

DRS-Filer is deployed using:

  • templates/drs-filer-deploy.yaml

Destroy

Simply run:

helm uninstall drs-filer